Boxplots of phosphor-proteomics data across clinic stages

A helper function draws boxplots for protein differential expression across clinical stages

.protein_boxplot(df, protein_name)

Arguments

df

a data frame of the combined proteomics and phosphorylation data generated inside .plot_boxgraph_protein_CPTAC()

protein_name

protein name

Details

This function should not be used directly, only inside .plot_boxgraph_protein_CPTAC().

Side effects:

(1) boxplots to show the different expression of protein across different clinical tumor stages

See also

Other helper function for protein coexpression analysis: .get_CPTAC_LUAD_Phosproteomics_subset(), .get_CPTAC_LUAD_Proteomics_subset(), .protein_scatterplot()