Univariable Cox-PH analyses of gene expression

A helper function generates univariable regression model of the gene expression within tumor samples and patient overall survival time TCGA.

.univariable_analysis(df, covariate_names)

Arguments

covariate_names

gene names from the input argument of .plot_CoxPH_RNAseq_TCGA()

gene

gene names, passed gene_list argument from .plot_CoxPH_RNAseq_TCGA()

data

df1 generated inside .plot_CoxPH_RNAseq_TCGA()

Value

a table of univariable Cox-PH

Details

It should not be used directly, only inside .plot_CoxPH_RNAseq_TCGA() function.

See also

Other helper function for survival analysis: .KM_curve(), .multivariable_analysis()

Examples

if (FALSE) {
.univariable_analysis(df = df1, covariate_names = EIF)
}