Read recomputed RNAseq data from both TCGA and GTEx

A helper function reads the dataset TcgaTargetGtex_RSEM_Hugo_norm_count, which contains the recomputed RNAseq data from both TCGA and GTEx.

.get_TCGA_GTEX_RNAseq()

Value

a data frame that contains the recomputed RNAseq data from both TCGA and GTEx

Details

The function also removes possible duplicated tumor samples and samples with NAs in the dataset. It should not be used directly, only inside initialize_RNAseq_data() function.

See also

Other helper function for data initialization: .get_TCGA_CNV_ratio(), .get_TCGA_CNV_value(), .get_TCGA_CNV(), .get_TCGA_RNAseq()

Examples

if (FALSE) {
.get_TCGA_GTEX_RNAseq()
}